1UEC Signaling Protein date May 11, 2003
title Crystal Structure Of Autoinhibited Form Of Tandem Sh3 Domain P47phox
authors S.Yuzawa, N.N.Suzuki, Y.Fujioka, K.Ogura, H.Sumimoto, F.Inagaki
compound source
Molecule: Neutrophil Cytosol Factor 1
Chain: A
Fragment: Autoinhibited Tandem Sh3 Domain, Redidues 151-340
Synonym: P47phox
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pproex Htb
symmetry Space Group: P 41 21 2
R_factor 0.213 R_Free 0.236
crystal
cell
length a length b length c angle alpha angle beta angle gamma
100.217 100.217 44.924 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.82 Å
related structures by homologous chain: 1OV3
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA molecular mechanism for autoinhibition of the tandem SH3 domains of p47phox, the regulatory subunit of the phagocyte NADPH oxidase., Yuzawa S, Suzuki NN, Fujioka Y, Ogura K, Sumimoto H, Inagaki F, Genes Cells 2004 May;9(5):443-56. PMID:15147273
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk]
  • Biological Unit Coordinates (1uec.pdb1.gz) 31 Kb
  • Biological Unit Coordinates (1uec.pdb2.gz) 61 Kb
  • CSU: Contacts of Structural Units for 1UEC
  • Likely Quarternary Molecular Structure file(s) for 1UEC
  • Structure Factors (200 Kb)
  • Retrieve 1UEC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UEC from S2C, [Save to disk]
  • Re-refined 1uec structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UEC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UEC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UEC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ueca1, region A:157-214 [Jmol] [rasmolscript] [script source]
        - Domain d1ueca2, region A:215-336 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uec] [1uec_A]
  • SWISS-PROT database: [P14598]
  • Domain organization of [NCF1_HUMAN] by SWISSPFAM
  • Domain found in 1UEC: [SH3 ] by SMART
  • Other resources with information on 1UEC
  • Community annotation for 1UEC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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