1UGI URACIL-DNA GLYCOSYLASE INHIBITOR PROTEIN date
authors Putnam, C.D., Arvai, A.S., Mol, C.D., Tainer, J.A.
compound source
symmetry
R_factor
R_Free 0.2886
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.55
ligand IMD, SO4 enzyme
note 1UGI is a representative structure
related structures by homologous chain: 1UGH
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Primary referenceProtein mimicry of DNA from crystal structures of the uracil-DNA glycosylase inhibitor protein and its complex with Escherichia coli uracil-DNA glycosylase., Putnam CD, Shroyer MJ, Lundquist AJ, Mol CD, Arvai AS, Mosbaugh DW, Tainer JA, J Mol Biol 1999 Mar 26;287(2):331-46. PMID:10080896
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (126 Kb) [Save to disk]
  • Biological Unit Coordinates (1ugi.pdb1.gz) 18 Kb
  • Biological Unit Coordinates (1ugi.pdb2.gz) 18 Kb
  • Biological Unit Coordinates (1ugi.pdb3.gz) 18 Kb
  • Biological Unit Coordinates (1ugi.pdb4.gz) 18 Kb
  • Biological Unit Coordinates (1ugi.pdb5.gz) 18 Kb
  • Biological Unit Coordinates (1ugi.pdb6.gz) 18 Kb
  • Biological Unit Coordinates (1ugi.pdb7.gz) 17 Kb
  • Biological Unit Coordinates (1ugi.pdb8.gz) 18 Kb
  • LPC: Ligand-Protein Contacts for 1UGI
  • CSU: Contacts of Structural Units for 1UGI
  • Likely Quarternary Molecular Structure file(s) for 1UGI
  • Structure Factors (1475 Kb)
  • Retrieve 1UGI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UGI from S2C, [Save to disk]
  • Re-refined 1ugi structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UGI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UGI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UGI, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ugia_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ugib_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ugic_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1ugid_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1ugie_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1ugif_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1ugig_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1ugih_, region H [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ugi_B] [1ugi_C] [1ugi] [1ugi_H] [1ugi_G] [1ugi_F] [1ugi_A] [1ugi_D] [1ugi_E]
  • SWISS-PROT database: [P14739]
  • Domain organization of [UNGI_BPPB2] by SWISSPFAM
  • Other resources with information on 1UGI
  • Community annotation for 1UGI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science