1ULS Oxidoreductase date Sep 16, 2003
title Crystal Structure Of Tt0140 From Thermus Thermophilus Hb8
authors Y.Hisanaga, H.Ago, K.Hamada, M.Sugahara, Y.Nodake, S.Kuramitsu, S. M.Miyano, Riken Structural Genomicsproteomics Initiative (R
compound source
Molecule: Putative 3-Oxoacyl-Acyl Carrier Protein Reductase
Chain: A, B, C, D, E, F, G, H
Ec: 1.1.1.100
Engineered: Yes
Mutation: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 274
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11a
symmetry Space Group: P 1
R_factor 0.196 R_Free 0.252
crystal
cell
length a length b length c angle alpha angle beta angle gamma
77.260 77.330 78.670 90.12 90.96 95.12
method X-Ray Diffractionresolution 2.40 Å
ligand MSE enzyme Oxidoreductase E.C.1.1.1.100 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
F, A, E, B, H, C, D, G


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (304 Kb) [Save to disk]
  • Biological Unit Coordinates (1uls.pdb1.gz) 150 Kb
  • Biological Unit Coordinates (1uls.pdb2.gz) 151 Kb
  • LPC: Ligand-Protein Contacts for 1ULS
  • CSU: Contacts of Structural Units for 1ULS
  • Likely Quarternary Molecular Structure file(s) for 1ULS
  • Structure Factors (545 Kb)
  • Retrieve 1ULS in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1ULS from S2C, [Save to disk]
  • Re-refined 1uls structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1ULS in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1ULS
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1ULS, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1ulsa_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1ulsb_, region B [Jmol] [rasmolscript] [script source]
        - Domain d1ulsc_, region C [Jmol] [rasmolscript] [script source]
        - Domain d1ulsd_, region D [Jmol] [rasmolscript] [script source]
        - Domain d1ulse_, region E [Jmol] [rasmolscript] [script source]
        - Domain d1ulsf_, region F [Jmol] [rasmolscript] [script source]
        - Domain d1ulsg_, region G [Jmol] [rasmolscript] [script source]
        - Domain d1ulsh_, region H [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uls_C] [1uls_H] [1uls] [1uls_B] [1uls_E] [1uls_D] [1uls_G] [1uls_A] [1uls_F]
  • SWISS-PROT database: [Q5SK98]
  • Domain organization of [Q5SK98_THET8] by SWISSPFAM
  • Other resources with information on 1ULS
  • Community annotation for 1ULS at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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