1UMN	Peroxide Resistance	date	Aug 26, 2003
title	Crystal Structure Of Dps-Like Peroxide Resistance Protein (D Streptococcus Suis
authors	A.Kauko, S.Haataja, A.Pulliainen, J.Finne, A.C.Papageorgiou
compound		source
Molecule: Dps-Like Peroxide Resistance Protein Chain: A, B, C, D, E, F, G, H, I, J, K, L Synonym: Dpr Engineered: Yes Other_details: N-Terminus Truncated First Seven Residues Re		Organism_scientific: Streptococcus Suis Organism_taxid: 1307 Strain: D282 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet30ek
symmetry	Space Group: P 21 21 21	R_factor 0.185 R_Free 0.224
crystal cell	length a length b length c angle alpha angle beta angle gamma 104.735 138.168 142.707 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.95 Å
ligand	CA, CL, EPE	enzyme
Gene Ontology	Chain Function Process Component F, A, J, K, E, B, H, C, D, I, G, L
Primary reference	Crystal structure of Streptococcus suis Dps-like peroxide resistance protein Dpr: implications for iron incorporation., Kauko A, Haataja S, Pulliainen AT, Finne J, Papageorgiou AC, J Mol Biol 2004 Apr 30;338(3):547-58. PMID:15081812

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (329 Kb) [Save to disk] Biological Unit Coordinates (1umn.pdb1.gz) 321 Kb LPC: Ligand-Protein Contacts for 1UMN CSU: Contacts of Structural Units for 1UMN Likely Quarternary Molecular Structure file(s) for 1UMN Structure Factors (1168 Kb) Retrieve 1UMN in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UMN from S2C, [Save to disk] Re-refined 1umn structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UMN in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UMN

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UMN, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1umna_, region A [Jmol] [rasmolscript] [script source]     - Domain d1umnb_, region B [Jmol] [rasmolscript] [script source]     - Domain d1umnc_, region C [Jmol] [rasmolscript] [script source]     - Domain d1umnd_, region D [Jmol] [rasmolscript] [script source]     - Domain d1umne_, region E [Jmol] [rasmolscript] [script source]     - Domain d1umnf_, region F [Jmol] [rasmolscript] [script source]     - Domain d1umng_, region G [Jmol] [rasmolscript] [script source]     - Domain d1umnh_, region H [Jmol] [rasmolscript] [script source]     - Domain d1umni_, region I [Jmol] [rasmolscript] [script source]     - Domain d1umnj_, region J [Jmol] [rasmolscript] [script source]     - Domain d1umnk_, region K [Jmol] [rasmolscript] [script source]     - Domain d1umnl_, region L [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1umn_H] [1umn_D] [1umn_F] [1umn_B] [1umn_E] [1umn_C] [1umn_L] [1umn_K] [1umn] [1umn_I] [1umn_G] [1umn_J] [1umn_A] SWISS-PROT database: [P0CB53] Domain organization of [DPS_STRSU] by SWISSPFAM

Other resources with information on 1UMN

Community annotation for 1UMN at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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