1UP5 Signalling Protein date Sep 27, 2003
title Chicken Calmodulin
authors M.A.Wilson, B.Rupp
compound source
Molecule: Calmodulin
Chain: A, B
Synonym: Cam
 Organism_scientific: Gallus Gallus
Organism_common: Chicken
Organism_taxid: 9031
Organ: Gizzard
Tissue: Smooth Muscle
symmetry Space Group: P 1
R_factor 0.206 R_Free 0.259
crystal
cell
length a length b length c angle alpha angle beta angle gamma
59.696 53.073 24.572 93.22 96.86 89.19
method X-Ray Diffractionresolution 1.90 Å
ligand CA, M3L enzyme
related structures by homologous chain: 1CM4, 1VRK
Gene
Ontology
ChainFunctionProcessComponent
A, B
  • enzyme regulator activity


    • Primary referenceCrystallization and preliminary X-ray analysis of two new crystal forms of calmodulin., Rupp B, Marshak DR, Parkin S, Acta Crystallogr D Biol Crystallogr. 1996 Mar 1;52(Pt 2):411-3. PMID:15299715
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1up5.pdb1.gz) 27 Kb
  • Biological Unit Coordinates (1up5.pdb2.gz) 27 Kb
  • LPC: Ligand-Protein Contacts for 1UP5
  • CSU: Contacts of Structural Units for 1UP5
  • Likely Quarternary Molecular Structure file(s) for 1UP5
  • Structure Factors (162 Kb)
  • Retrieve 1UP5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UP5 from S2C, [Save to disk]
  • Re-refined 1up5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1UP5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1UP5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UP5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1up5_A] [1up5_B] [1up5]
  • SWISS-PROT database: [P62149]
  • Domain organization of [CALM_CHICK] by SWISSPFAM
  • Domain found in 1UP5: [EFh ] by SMART
    • Other resources with information on 1UP5
  • Community annotation for 1UP5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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