1UTT	Hydrolase	date	Dec 10, 2003
title	Crystal Structure Of Mmp-12 Complexed To 2-(1,3-Dioxo-1,3-Di Isoindol-2-Yl)Ethyl-4-(4-Ethoxy[1,1-Biphenyl]-4-Yl)-4-Oxobu Acid
authors	R.Morales, S.Perrier, J.M.Florent, J.Beltra, S.Dufour, I.De Mende P.Manceau, A.Tertre, F.Moreau, D.Compere, A.C.Dublanchet, M.O'Ga
compound		source
Molecule: Macrophage Metalloelastase Chain: A Fragment: Catalytic Domain, Residues 106-264 Synonym: Hme, Matrix Metalloproteinase-12, Mmp-12, Macropha Elastase, Me; Ec: 3.4.24.65 Engineered: Yes Other_details: Complexed With A Small Molecule Inhibitor 2- Dioxo-1,3-Dihydro-2h-Isoindol-2-Yl)Ethyl-4-(4-Ethoxy[1,1-Bi Yl)-4-Oxobutanoic Acid Formula C19h19n2o4s, And Also With Acetohydroxamic Acid Or 2-Hydroxyamino-2-Ethanal Formula, C		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pgemex1
symmetry	Space Group: P 41 3 2	R_factor 0.217 R_Free 0.229
crystal cell	length a length b length c angle alpha angle beta angle gamma 125.041 125.041 125.041 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.20 Å
ligand	CA, CP8, HAE, ZN	enzyme	Hydrolase E.C.3.4.24.65 BRENDA
related structures	by homologous chain: 1OS2, 1UTZ
Gene Ontology	Chain Function Process Component A
Primary reference	Crystal structures of novel non-peptidic, non-zinc chelating inhibitors bound to MMP-12., Morales R, Perrier S, Florent JM, Beltra J, Dufour S, De Mendez I, Manceau P, Tertre A, Moreau F, Compere D, Dublanchet AC, O'Gara M, J Mol Biol. 2004 Aug 20;341(4):1063-76. PMID:15289103

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (35 Kb) [Save to disk] Biological Unit Coordinates (1utt.pdb1.gz) 163 Kb LPC: Ligand-Protein Contacts for 1UTT CSU: Contacts of Structural Units for 1UTT Likely Quarternary Molecular Structure file(s) for 1UTT Structure Factors (136 Kb) Retrieve 1UTT in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1UTT from S2C, [Save to disk] Re-refined 1utt structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1UTT in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1UTT

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1UTT, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1utta_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1utt_A] [1utt] SWISS-PROT database: [P39900] Domain organization of [MMP12_HUMAN] by SWISSPFAM Domain found in 1UTT: [ZnMc ] by SMART

Other resources with information on 1UTT

Community annotation for 1UTT at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---