1UW9 Lyase date Feb 03, 2004
title L290f-A222t Chlamydomonas Rubisco Mutant
authors S.Karkehabadi, T.C.Taylor, R.J.Spreitzer, I.Andersson
compound source
Molecule: Ribulose Bisphosphate Carboxylase Large Chain
Chain: A, B, E, H, K, O, R, V
Synonym: Rubisco Large Subunit, Ribulose-1,5 Bisphosphate C Large Chain;
Ec: 4.1.1.39
Mutation: Yes
Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055

Molecule: Ribulose Bisphosphate Carboxylase Small Chain 1
Chain: C, F, I, J, M, P, T, W
Synonym: Rubisco Small Subunit 1
Ec: 4.1.1.39

Organism_scientific: Chlamydomonas Reinhardtii
Organism_taxid: 3055
symmetry Space Group: P 1 21 1
R_factor 0.157 R_Free 0.194
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.073 178.196 120.463 90.00 120.35 90.00
method X-Ray Diffractionresolution 2.05 Å
ligand CAP, EDO, HYP, KCX, MG, SMC enzyme Lyase E.C.4.1.1.39 BRENDA
related structures by homologous chain: 1IR2, 1UZH, 3RUB
Gene
Ontology
ChainFunctionProcessComponent
H, A, O, R, K, E, B, V


Primary referenceAltered intersubunit interactions in crystal structures of catalytically compromised ribulose-1,5-bisphosphate carboxylase/oxygenase., Karkehabadi S, Taylor TC, Spreitzer RJ, Andersson I, Biochemistry. 2005 Jan 11;44(1):113-20. PMID:15628851
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (825 Kb) [Save to disk]
  • Biological Unit Coordinates (1uw9.pdb1.gz) 812 Kb
  • LPC: Ligand-Protein Contacts for 1UW9
  • CSU: Contacts of Structural Units for 1UW9
  • Likely Quarternary Molecular Structure file(s) for 1UW9
  • Structure Factors (1979 Kb)
  • Retrieve 1UW9 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UW9 from S2C, [Save to disk]
  • Re-refined 1uw9 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1UW9 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UW9
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UW9, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uw9_F] [1uw9_J] [1uw9_M] [1uw9_K] [1uw9_R] [1uw9_E] [1uw9_C] [1uw9_V] [1uw9_I] [1uw9_W] [1uw9_O] [1uw9_T] [1uw9_P] [1uw9_A] [1uw9_H] [1uw9_B] [1uw9]
  • SWISS-PROT database: [P00877] [P00873]
  • Domain organization of [RBL_CHLRE] [RBS1_CHLRE] by SWISSPFAM
  • Domain found in 1UW9: [RuBisCO_small ] by SMART
  • Other resources with information on 1UW9
  • Community annotation for 1UW9 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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