1UWY Hydrolase date Feb 17, 2004
title Crystal Structure Of Human Carboxypeptidase M
authors K.Maskos, D.Reverter, W.Bode
compound source
Molecule: Carboxypeptidase M
Chain: A
Ec: 3.4.17.12
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Spodoptera Frugiperda
Expression_system_taxid: 7108
Expression_system_strain: Sf9
Expression_system_vector_type: Baculovirus
Expression_system_plasmid: Pvl1393
symmetry Space Group: P 32 2 1
R_factor 0.206 R_Free 0.286
crystal
cell
length a length b length c angle alpha angle beta angle gamma
85.830 85.830 124.540 90.00 90.00 120.00
method X-Ray Diffractionresolution 3.00 Å
ligand NAG, ZN enzyme Hydrolase E.C.3.4.17.12 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structure of human carboxypeptidase M, a membrane-bound enzyme that regulates peptide hormone activity., Reverter D, Maskos K, Tan F, Skidgel RA, Bode W, J Mol Biol 2004 Apr 23;338(2):257-69. PMID:15066430
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (1uwy.pdb1.gz) 65 Kb
  • LPC: Ligand-Protein Contacts for 1UWY
  • CSU: Contacts of Structural Units for 1UWY
  • Likely Quarternary Molecular Structure file(s) for 1UWY
  • Retrieve 1UWY in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UWY from S2C, [Save to disk]
  • View 1UWY in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1UWY
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UWY, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uwya2, region A:1-296 [Jmol] [rasmolscript] [script source]
        - Domain d1uwya1, region A:297-403 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uwy] [1uwy_A]
  • SWISS-PROT database: [P14384]
  • Domain organization of [CBPM_HUMAN] by SWISSPFAM
  • Domain found in 1UWY: [Zn_pept ] by SMART
  • Other resources with information on 1UWY
  • Community annotation for 1UWY at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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