1UXC Transcription Regulation date Dec 26, 1996
title Fructose Repressor Dna-Binding Domain, Nmr, Minimized Struct
authors F.Penin, C.Geourjon, R.Montserret, A.Bockmann, A.Lesage, Y.Yang, C Bidaud, J.C.Cortay, D.Negre, A.J.Cozzone, G.Deleage
compound source
Molecule: Fructose Repressor
Chain: A
Fragment: Dna-Binding Domain, Residues 1 - 57, With Lqhhhhh C-Terminus;
Synonym: Frur (1-57)
Engineered: Yes
Mutation: Yes
 Organism_scientific: Escherichia Coli
Organism_taxid: 83333
Strain: K12
Variant: K12
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_plasmid: Pcb4
Expression_system_gene: Frur1
Other_details: Overproduced In Fusion With A Lqhhhhhh Seque Terminal End, Residues 58 - 65
methodSolution NMR
related structures by homologous chain: 1UXD
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThree-dimensional structure of the DNA-binding domain of the fructose repressor from Escherichia coli by 1H and 15N NMR., Penin F, Geourjon C, Montserret R, Bockmann A, Lesage A, Yang YS, Bonod-Bidaud C, Cortay JC, Negre D, Cozzone AJ, Deleage G, J Mol Biol 1997 Jul 18;270(3):496-510. PMID:9237914
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (17 Kb) [Save to disk]
  • Biological Unit Coordinates (1uxc.pdb1.gz) 15 Kb
  • CSU: Contacts of Structural Units for 1UXC
  • Original NMR restraints for 1UXC from PDB
  • Retrieve 1UXC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UXC from S2C, [Save to disk]
    • View 1UXC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1UXC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UXC, from MSDmotif at EBI
  • Genome occurence of 1UXC's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uxc__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uxc] [1uxc_A]
  • SWISS-PROT database: [P0ACP1]
  • Domain organization of [FRUR_ECOLI] by SWISSPFAM
  • Domain found in 1UXC: [HTH_LACI ] by SMART
    • Other resources with information on 1UXC
  • Community annotation for 1UXC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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