1UZ5 Molybdopterin Biosynthesis date Mar 05, 2004
title The Crystal Structure Of Molybdopterin Biosynthesis Moea Protein From Pyrococcus Horikosii
authors H.Takahashi, T.H.Tahirov
compound source
Molecule: 402aa Long Hypothetical Molybdopterin Biosynthesis Moea Protein;
Chain: A
Synonym: Moea Protein
Engineered: Yes
 Organism_scientific: Pyrococcus Horikoshii
Organism_taxid: 70601
Strain: Ot3
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_plasmid: Pet 11a
symmetry Space Group: P 61 2 2
R_factor 0.218 R_Free 0.247
crystal
cell
length a length b length c angle alpha angle beta angle gamma
181.375 181.375 71.311 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.05 Å
ligand SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (71 Kb) [Save to disk]
  • Biological Unit Coordinates (1uz5.pdb1.gz) 66 Kb
  • LPC: Ligand-Protein Contacts for 1UZ5
  • CSU: Contacts of Structural Units for 1UZ5
  • Likely Quarternary Molecular Structure file(s) for 1UZ5
  • Structure Factors (608 Kb)
  • Retrieve 1UZ5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1UZ5 from S2C, [Save to disk]
  • Re-refined 1uz5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1UZ5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1UZ5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1UZ5, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1uz5a3, region A:181-328 [Jmol] [rasmolscript] [script source]
        - Domain d1uz5a1, region A:329-402 [Jmol] [rasmolscript] [script source]
        - Domain d1uz5a2, region A:5-180 [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1uz5_A] [1uz5]
  • SWISS-PROT database: [O58335]
  • Domain organization of [O58335_PYRHO] by SWISSPFAM
  • Domain found in 1UZ5: [MoCF_biosynth ] by SMART
    • Other resources with information on 1UZ5
  • Community annotation for 1UZ5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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