1V3E Hydrolase date Oct 30, 2003
title Structure Of The Hemagglutinin-Neuraminidase From Human Para Virus Type III: Complex With Zanamavir
authors M.C.Lawrence, N.A.Borg, V.A.Streltsov, P.A.Pilling, V.C.Epa, J.N. J.L.Mckimm-Breschkin, P.M.Colman
compound source
Molecule: Hemagglutinin-Neuraminidase Glycoprotein
Chain: A, B
Fragment: Residues 142-572
Synonym: Hemagglutinin-Neuraminidase, Hn
Ec: 3.2.1.18
Engineered: Yes
Organism_scientific: Human Parainfluenza Virus 3
Organism_taxid: 11216
Expression_system: Trichoplusia Ni
Expression_system_common: Cabbage Looper
Expression_system_taxid: 7111
Expression_system_cell_line: High Five
Expression_system_vector_type: Baculovirus
symmetry Space Group: P 62 2 2
R_factor 0.184 R_Free 0.219
crystal
cell
length a length b length c angle alpha angle beta angle gamma
218.451 218.451 109.904 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.89 Å
ligand CA, NAG, SO4, ZMR enzyme Hydrolase E.C.3.2.1.18 BRENDA
related structures by homologous chain: 1V3B
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructure of the Haemagglutinin-neuraminidase from Human Parainfluenza Virus Type III., Lawrence MC, Borg NA, Streltsov VA, Pilling PA, Epa VC, Varghese JN, McKimm-Breschkin JL, Colman PM, J Mol Biol 2004 Jan 30;335(5):1343-57. PMID:14729348
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (166 Kb) [Save to disk]
  • Biological Unit Coordinates (1v3e.pdb1.gz) 158 Kb
  • LPC: Ligand-Protein Contacts for 1V3E
  • CSU: Contacts of Structural Units for 1V3E
  • Likely Quarternary Molecular Structure file(s) for 1V3E
  • Structure Factors (1054 Kb)
  • Retrieve 1V3E in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1V3E from S2C, [Save to disk]
  • Re-refined 1v3e structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1V3E in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1V3E
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1V3E, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1v3ea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1v3eb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1v3e_B] [1v3e] [1v3e_A]
  • SWISS-PROT database: [Q6WJ03]
  • Domain organization of [Q6WJ03_9PARA] by SWISSPFAM
  • Other resources with information on 1V3E
  • Community annotation for 1V3E at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science