1V6G Metal Binding Protein date Nov 29, 2003
title Solution Structure Of The Lim Domain Of The Human Actin Bind Protein 2
authors K.Miyamoto, T.Tomizawa, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Actin Binding Lim Protein 2
Chain: A
Fragment: Lim Domain
Synonym: Kiaa1808 Protein
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kazusa Cdna Fk00917
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P020930-36
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
ligand ZN enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (379 Kb) [Save to disk]
  • Biological Unit Coordinates (1v6g.pdb1.gz) 19 Kb
  • LPC: Ligand-Protein Contacts for 1V6G
  • CSU: Contacts of Structural Units for 1V6G
  • Retrieve 1V6G in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1V6G from S2C, [Save to disk]
  • View 1V6G in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1V6G
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1V6G, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1v6ga1, region A:1-41 [Jmol] [rasmolscript] [script source]
        - Domain d1v6ga2, region A:42-81 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1v6g_A] [1v6g]
  • SWISS-PROT database: [Q6H8Q1]
  • Domain organization of [ABLM2_HUMAN] by SWISSPFAM
  • Domain found in 1V6G: [LIM ] by SMART
  • Other resources with information on 1V6G
  • Community annotation for 1V6G at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science