1VJX Unknown Function date Apr 01, 2004
title Crystal Structure Of A Putative Ferritin-Like Diiron-Carboxy Protein (Tm1526) From Thermotoga Maritima At 2.30 A Resolut
authors Joint Center For Structural Genomics (Jcsg)
compound source
Molecule: Putative Ferritin-Like Diiron-Carboxylate Protein
Chain: A
Engineered: Yes
Organism_scientific: Thermotoga Maritima
Organism_taxid: 2336
Gene: Tm1526
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
symmetry Space Group: I 41 2 2
R_factor 0.217 R_Free 0.257
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.333 82.333 121.641 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.30 Å
ligand MSE enzyme
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (31 Kb) [Save to disk]
  • Biological Unit Coordinates (1vjx.pdb1.gz) 26 Kb
  • LPC: Ligand-Protein Contacts for 1VJX
  • CSU: Contacts of Structural Units for 1VJX
  • Likely Quarternary Molecular Structure file(s) for 1VJX
  • Structure Factors (2231 Kb)
  • Retrieve 1VJX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VJX from S2C, [Save to disk]
  • Re-refined 1vjx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1VJX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1VJX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1VJX, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1vjxa_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vjx_A] [1vjx]
  • SWISS-PROT database: [Q9X1L2]
  • Domain organization of [Q9X1L2_THEMA] by SWISSPFAM
  • Other resources with information on 1VJX
  • Community annotation for 1VJX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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