1VNA Neurotoxin date Oct 26, 1993
title Proton Nuclear Magnetic Resonance And Distance Geometry(Slas Simulated Annealing Studies On The Variant-1 Neurotoxin Fro World Scorpion Centruroides Sculpturatus Ewing
authors W.Lee, N.R.Krishna
compound source
Molecule: Neurotoxin
Chain: A
Engineered: Yes
Organism_scientific: Centruroides Sculpturatus
Organism_common: Bark Scorpion
Organism_taxid: 218467
methodSolution NMR
related structures by homologous chain: 1JZB, 1VNB
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Primary referenceProton nuclear magnetic resonance and distance geometry/simulated annealing studies on the variant-1 neurotoxin from the New World scorpion Centruroides sculpturatus Ewing., Lee W, Jablonsky MJ, Watt DD, Krishna NR, Biochemistry 1994 Mar 8;33(9):2468-75. PMID:8117707
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (422 Kb) [Save to disk]
  • Biological Unit Coordinates (1vna.pdb1.gz) 17 Kb
  • CSU: Contacts of Structural Units for 1VNA
  • Retrieve 1VNA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VNA from S2C, [Save to disk]
  • View 1VNA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1VNA
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1VNA, from MSDmotif at EBI
  • Genome occurence of 1VNA's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1vna__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vna_A] [1vna]
  • SWISS-PROT database: [P01492]
  • Domain organization of [SCX1_CENSC] by SWISSPFAM
  • Domain found in 1VNA: [Knot1 ] by SMART
  • Other resources with information on 1VNA
  • Community annotation for 1VNA at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science