4V7O	Proteasome Activator Complex	date
authors	Hill, C.P., Whitby, F.G.
compound		source
symmetry		R_factor R_Free 0.250
crystal cell	length a length b length c angle alpha angle beta angle gamma
method	X-Ray Diffraction	resolution	3.00
note	4V7O supersedes 1VSY, 3L5Q
Gene Ontology	Chain Function Process Component AB, AD, BH, BV proteasome core complex, bet... AC, BO, AA, BA proteasome core complex, alp... AL, BG, AX, BU AN, BX, AZ, BJ endopeptidase activator acti... proteasome core complex, bet... AO, BY, A1, BK endopeptidase activator acti... proteasome core complex, bet... B1, AQ, A3, BM B7, B4, A8, B8, A7, B5, A6, A5 BB, BP, AG, AS proteasome core complex, alp... BE, AJ, BS, AV proteasome core complex, alp... BF, BT, AK, AW proteasome core complex, alp... BN, AU, AI, B2, A4, AR, BR, BD BQ, BC, AT, AH proteasome core complex, alp... BW, AY, BL, BI, AM, AP, A2, BZ
Primary reference	Structure of a Blm10 complex reveals common mechanisms for proteasome binding and gate opening., Sadre-Bazzaz K, Whitby FG, Robinson H, Formosa T, Hill CP, Mol Cell. 2010 Mar 12;37(5):728-35. PMID:20227375

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (3765 Kb) [Save to disk] CSU: Contacts of Structural Units for 4V7O Structure Factors (7172 Kb) Retrieve 4V7O in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 4V7O from S2C, [Save to disk]

View 4V7O in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 4V7O

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [4v7o_A3] [4v7o_BU] [4v7o_AH] [4v7o_AV] [4v7o_BS] [4v7o_AC] [4v7o_BW] [4v7o_AS] [4v7o_A2] [4v7o_B4] [4v7o_BY] [4v7o_BL] [4v7o_A6] [4v7o_B1] [4v7o_BV] [4v7o_AW] [4v7o_B7] [4v7o_AL] [4v7o_BN] [4v7o_BR] [4v7o_BJ] [4v7o_BM] [4v7o_BF] [4v7o_AE] [4v7o_AY] [4v7o_BI] [4v7o_BD] [4v7o_BX] [4v7o_AU] [4v7o_BP] [4v7o_AK] [4v7o_B2] [4v7o_AX] [4v7o_AM] [4v7o_B5] [4v7o_AD] [4v7o_AZ] [4v7o_AJ] [4v7o_B8] [4v7o_AP] [4v7o_AO] [4v7o_AA] [4v7o_A7] [4v7o_AF] [4v7o_BO] [4v7o_A8] [4v7o] [4v7o_AR] [4v7o_AG] [4v7o_AQ] [4v7o_A1] [4v7o_B3] [4v7o_AN] [4v7o_BQ] [4v7o_B6] [4v7o_BB] [4v7o_BZ] [4v7o_AT] [4v7o_BC] [4v7o_BG] [4v7o_BA] [4v7o_AI] [4v7o_BK] [4v7o_A5] [4v7o_BE] [4v7o_BT] [4v7o_AB] [4v7o_BH] [4v7o_A4] SWISS-PROT database: Domain organization of by SWISSPFAM Domain found in 4V7O: [Proteasome_A_N ] by SMART

Other resources with information on 4V7O

Community annotation for 4V7O at PDBWiki (http://pdbwiki.org)

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