1VYC Neurotoxin date Apr 26, 2004
title Neurotoxin From Bungarus Candidus
authors G.Gopinath
compound source
Molecule: Bucain
Chain: A
Synonym: Neurotoxin
Other_details: Belongs To The Snake Toxin Family, Orphan Gr Subfamily
Organism_scientific: Bungarus Candidus
Organism_common: Malaysian Krait
Organism_taxid: 92438
Other_details: Malaysian Krait
methodSolution NMR; Theoretical Model
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (14 Kb) [Save to disk]
  • Biological Unit Coordinates (1vyc.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 1VYC
  • Retrieve 1VYC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1VYC from S2C, [Save to disk]
  • View 1VYC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1VYC
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1VYC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1vyca_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1vyc_A] [1vyc]
  • SWISS-PROT database: [P83346]
  • Belongs to the snake cytotoxin (sct) family according to TCDB.
  • Domain organization of [BCIN_BUNCA] by SWISSPFAM
  • Other resources with information on 1VYC
  • Community annotation for 1VYC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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