1VYF	Transport Protein	date	Apr 29, 2004
title	Schistosoma Mansoni Fatty Acid Binding Protein In Complex Wi Acid
authors	F.Angelucci, K.A.Johnson, P.Baiocco, A.E.Miele, A.Bellelli
compound		source
Molecule: 14 Kda Fatty Acid Binding Protein Chain: A Synonym: Sm14 Engineered: Yes Other_details: 2 Additional Amino Acids At The N-Terminus		Organism_scientific: Schistosoma Mansoni Organism_common: Blood Fluke Organism_taxid: 6183 Strain: Brazilian Bh Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pdest17 Other_details: Cdna
symmetry	Space Group: P 21 21 2	R_factor 0.190 R_Free 0.240
crystal cell	length a length b length c angle alpha angle beta angle gamma 43.261 92.395 36.225 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.85 Å
ligand	OLA	enzyme
related structures	by homologous chain: 1VYG
Gene Ontology	Chain Function Process Component A
Primary reference	Schistosoma mansoni fatty acid binding protein: specificity and functional control as revealed by crystallographic structure., Angelucci F, Johnson KA, Baiocco P, Miele AE, Brunori M, Valle C, Vigorosi F, Troiani AR, Liberti P, Cioli D, Klinkert MQ, Bellelli A, Biochemistry. 2004 Oct 19;43(41):13000-11. PMID:15476393

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (30 Kb) [Save to disk] Biological Unit Coordinates (1vyf.pdb1.gz) 26 Kb LPC: Ligand-Protein Contacts for 1VYF CSU: Contacts of Structural Units for 1VYF Likely Quarternary Molecular Structure file(s) for 1VYF Structure Factors (87 Kb) Retrieve 1VYF in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1VYF from S2C, [Save to disk] Re-refined 1vyf structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1VYF in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1VYF

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1VYF, from MSDmotif at EBI Classification of representative domains in scop (Structural Classification of Proteins)     - Domain d1vyfa_, region A [Jmol] [rasmolscript] [script source]

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1vyf_A] [1vyf] SWISS-PROT database: [P29498] Domain organization of [FABP_SCHMA] by SWISSPFAM

Other resources with information on 1VYF

Community annotation for 1VYF at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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