1W5Z	Oxidoreductase	date	Aug 11, 2004
title	Agao Covalent Complex With Benzylhydrazine
authors	A.P.Duff, D.M.Trambaiolo, D.B.Langley, G.A.Juda, E.M.Shepard, D.M H.C.Freeman, J.M.Guss
compound		source
Molecule: Phenylethylamine Oxidase Chain: A Synonym: Arthrobacter Globiformis Copper Amine Oxidase, Ami Oxidase; Ec: 1.4.3.6 Engineered: Yes Other_details: Residue A382 Was An Active Site Tyrosine Res Which Was Autocatalytically Modified To Become Tpq, And Was Covalently Linked To The Suicide Inhibitor Benzylhydrazine.		Organism_scientific: Arthrobacter Globiformis Organism_taxid: 1665 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_vector: Pet-3c (Novagen) Expression_system_plasmid: Pagao2
symmetry	Space Group: C 1 2 1	R_factor 0.152 R_Free 0.187
crystal cell	length a length b length c angle alpha angle beta angle gamma 158.126 62.665 92.283 90.00 112.07 90.00
method	X-Ray Diffraction	resolution	1.86 Å
ligand	3TY, CU, GOL, NA, SO4	enzyme	Oxidoreductase E.C.1.4.3.6 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Complexes of the copper-containing amine oxidase from Arthrobacter globiformis with the inhibitors benzylhydrazine and tranylcypromine., Langley DB, Trambaiolo DM, Duff AP, Dooley DM, Freeman HC, Guss JM, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Jul 1;64(Pt, 7):577-83. Epub 2008 Jun 11. PMID:18607080

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (198 Kb) [Save to disk] Biological Unit Coordinates (1w5z.pdb1.gz) 377 Kb LPC: Ligand-Protein Contacts for 1W5Z CSU: Contacts of Structural Units for 1W5Z Likely Quarternary Molecular Structure file(s) for 1W5Z Structure Factors (973 Kb) Retrieve 1W5Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1W5Z from S2C, [Save to disk] Re-refined 1w5z structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1W5Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1W5Z

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1W5Z, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1w5z_A] [1w5z] SWISS-PROT database: [P46881] Domain organization of [PAOX_ARTGO] by SWISSPFAM

Other resources with information on 1W5Z

Community annotation for 1W5Z at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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