1W66 Transferase date Aug 13, 2004
title Structure Of A Lipoate-Protein Ligase B From Mycobacterium Tuberculosis
authors Q.Ma, M.Wilmanns
compound source
Molecule: Lipoyltransferase
Chain: A
Synonym: Lipoate-Protein Ligase B, Lipoyl-[Acyl-Carrier Pro Protein-N-Lipoyltransferase;
Ec: 2.3.1.-
Engineered: Yes
Organism_scientific: Mycobacterium Tuberculosis
Organism_taxid: 83332
Strain: H37rv
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_variant: Rosetta Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Petm11
symmetry Space Group: P 21 21 21
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
48.918 57.369 73.804 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.08 Å
ligand DKA enzyme Transferase E.C.2.3.1 BRENDA
note 1W66 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Mycobacterium tuberculosis LipB enzyme functions as a cysteine/lysine dyad acyltransferase., Ma Q, Zhao X, Nasser Eddine A, Geerlof A, Li X, Cronan JE, Kaufmann SH, Wilmanns M, Proc Natl Acad Sci U S A. 2006 Jun 6;103(23):8662-7. Epub 2006 May 30. PMID:16735476
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (84 Kb) [Save to disk]
  • Biological Unit Coordinates (1w66.pdb1.gz) 80 Kb
  • LPC: Ligand-Protein Contacts for 1W66
  • CSU: Contacts of Structural Units for 1W66
  • Likely Quarternary Molecular Structure file(s) for 1W66
  • Structure Factors (1188 Kb)
  • Retrieve 1W66 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W66 from S2C, [Save to disk]
  • Re-refined 1w66 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1W66 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W66
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W66, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w66_A] [1w66]
  • SWISS-PROT database: [Q10404]
  • Domain organization of [LIPB_MYCTU] by SWISSPFAM
  • Other resources with information on 1W66
  • Community annotation for 1W66 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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