1W6B Toxin date Aug 17, 2004
title Solution Nmr Structure Of A Long Neurotoxin From The Venom O Asian Cobra, 20 Structures
authors M.Talebzadeh-Farooji, M.Amininasab, M.M.Elmi, H.Naderi-Manesh, M.N.Sarbolouki
compound source
Molecule: Long Neurotoxin 1
Chain: A
Synonym: Neurotoxin I, Ntx-1
Organism_scientific: Naja Oxiana
Organism_common: Asian Cobra
Organism_taxid: 8657
Organ: Venom Glands
methodSolution NMR
related structures by homologous chain: 1LXH, 1TXB, 2BTX
Gene
Ontology
ChainFunctionProcessComponent
A
  • toxin activity


  • Primary referenceSolution structure of long neurotoxin NTX-1 from the venom of Naja naja oxiana by 2D-NMR spectroscopy., Talebzadeh-Farooji M, Amininasab M, Elmi MM, Naderi-Manesh H, Sarbolouki MN, Eur J Biochem. 2004 Dec;271(23-24):4950-7. PMID:15606783
    Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (406 Kb) [Save to disk]
  • Biological Unit Coordinates (1w6b.pdb1.gz) 21 Kb
  • CSU: Contacts of Structural Units for 1W6B
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1W6B in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1W6B from S2C, [Save to disk]
  • View 1W6B in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1W6B
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1W6B, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1w6ba_, region A [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1w6b] [1w6b_A]
  • SWISS-PROT database: [P01382]
  • Belongs to the snake cytotoxin (sct) family according to TCDB.
  • Domain organization of [NXL1_NAJOX] by SWISSPFAM
  • Other resources with information on 1W6B
  • Community annotation for 1W6B at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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