1WAU	Lyase	date	Oct 28, 2004
title	Structure Of Kdpg Aldolase E45n Mutant
authors	A.B.Merkel, J.H.Naismith
compound		source
Molecule: Khgkdpg Aldolase Chain: A Synonym: 4-Hydroxy-2-Oxoglutarate Aldolase, 2-Keto-4-Hydrox Aldolase, Khg-Aldolase, 2-Dehydro-3-Deoxy-Phosphogluconate Phospho-2-Dehydro-3-Deoxygluconate Aldolase, Phospho-2-Keto Deoxygluconate Aldolase, 2-Keto-3-Deoxy-6-Phosphogluconate Ec: 4.1.2.14, 4.1.3.16 Engineered: Yes Mutation: Yes		Organism_scientific: Escherichia Coli Organism_taxid: 562 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_plasmid: Pet30b
symmetry	Space Group: P 3 2 1	R_factor 0.171 R_Free 0.246
crystal cell	length a length b length c angle alpha angle beta angle gamma 105.195 105.195 51.444 90.00 90.00 120.00
method	X-Ray Diffraction	resolution	2.80 Å
ligand	SO4	enzyme	Lyase E.C.4.1.2.14 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Mechanism of the Class I KDPG aldolase., Fullerton SW, Griffiths JS, Merkel AB, Cheriyan M, Wymer NJ, Hutchins MJ, Fierke CA, Toone EJ, Naismith JH, Bioorg Med Chem. 2006 May 1;14(9):3002-10. Epub 2006 Jan 5. PMID:16403639

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk] Biological Unit Coordinates (1wau.pdb1.gz) 98 Kb LPC: Ligand-Protein Contacts for 1WAU CSU: Contacts of Structural Units for 1WAU Likely Quarternary Molecular Structure file(s) for 1WAU Structure Factors (109 Kb) Retrieve 1WAU in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WAU from S2C, [Save to disk] Re-refined 1wau structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WAU in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WAU

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WAU, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wau] [1wau_A] SWISS-PROT database: [P0A955] Domain organization of [ALKH_ECOLI] by SWISSPFAM

Other resources with information on 1WAU

Community annotation for 1WAU at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---