1WAX Hydrolase date Oct 28, 2004
title Protein Tyrosine Phosphatase 1b With Active Site Inhibitor
authors M.J.Hartshorn, C.W.Murray, A.Cleasby, M.Frederickson, I.J.Tickle
compound source
Molecule: Protein-Tyrosine Phosphatase
Chain: A
Fragment: Catalytic Domain, Residues 1-321
Synonym: Non-Receptor Type 1, Protein-Tyrosine Phosphatase 1bnon Receptor;
Ec: 3.1.3.48
Engineered: Yes
Other_details: Active Site Inhibitor Of Ptp1b
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_variant: De3
Expression_system_plasmid: Pet19b
symmetry Space Group: P 31 2 1
R_factor 0.198 R_Free 0.266
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.095 88.095 104.497 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.20 Å
ligand LO1, MG enzyme Hydrolase E.C.3.1.3.48 BRENDA
related structures by homologous chain: 1G7G, 1PYN
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceFragment-based lead discovery using X-ray crystallography., Hartshorn MJ, Murray CW, Cleasby A, Frederickson M, Tickle IJ, Jhoti H, J Med Chem. 2005 Jan 27;48(2):403-13. PMID:15658854
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (61 Kb) [Save to disk]
  • Biological Unit Coordinates (1wax.pdb1.gz) 54 Kb
  • LPC: Ligand-Protein Contacts for 1WAX
  • CSU: Contacts of Structural Units for 1WAX
  • Likely Quarternary Molecular Structure file(s) for 1WAX
  • Retrieve 1WAX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WAX from S2C, [Save to disk]
  • View 1WAX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WAX
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WAX, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wax] [1wax_A]
  • SWISS-PROT database: [P18031]
  • Domain organization of [PTN1_HUMAN] by SWISSPFAM
  • Domains found in 1WAX: [PTPc] [PTPc_DSPc ] by SMART
  • Other resources with information on 1WAX
  • Community annotation for 1WAX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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