1WBJ Lyase date Nov 01, 2004
title Wildtype Tryptophan Synthase Complexed With Glycerol Phospha
authors V.Kulik, M.Weyand, I.Schlichting
compound source
Molecule: Tryptophan Synthase Alpha Chain
Chain: A
Ec: 4.2.1.20
Engineered: Yes
Organism_scientific: Salmonella Typhimurium
Organism_taxid: 602
Expression_system: Escherichia Coli
Expression_system_taxid: 562

Molecule: Tryptophan Synthase Beta Chain
Chain: B
Ec: 4.2.1.20
Engineered: Yes

Organism_scientific: Salmonella Typhimurium
Organism_taxid: 602
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: C 1 2 1
R_factor 0.179 R_Free 0.202
crystal
cell
length a length b length c angle alpha angle beta angle gamma
182.045 59.558 67.409 90.00 94.56 90.00
method X-Ray Diffractionresolution 1.50 Å
ligand G3P, NA, PLP enzyme Lyase E.C.4.2.1.20 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


B


Primary referenceOn the structural basis of the catalytic mechanism and the regulation of the alpha subunit of tryptophan synthase from Salmonella typhimurium and BX1 from maize, two evolutionarily related enzymes., Kulik V, Hartmann E, Weyand M, Frey M, Gierl A, Niks D, Dunn MF, Schlichting I, J Mol Biol. 2005 Sep 23;352(3):608-20. PMID:16120446
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (118 Kb) [Save to disk]
  • Biological Unit Coordinates (1wbj.pdb1.gz) 221 Kb
  • LPC: Ligand-Protein Contacts for 1WBJ
  • CSU: Contacts of Structural Units for 1WBJ
  • Likely Quarternary Molecular Structure file(s) for 1WBJ
  • Structure Factors (1257 Kb)
  • Retrieve 1WBJ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WBJ from S2C, [Save to disk]
  • Re-refined 1wbj structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1WBJ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WBJ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WBJ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wbj] [1wbj_A] [1wbj_B]
  • SWISS-PROT database: [P00929] [P0A2K1]
  • Domain organization of [TRPA_SALTY] [TRPB_SALTY] by SWISSPFAM
  • Other resources with information on 1WBJ
  • Community annotation for 1WBJ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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