1WBW	Transferase	date	Nov 05, 2004
title	Identification Of Novel P38 Alpha Map Kinase Inhibitors Using Fragment-Based Lead Generation.
authors	J.Tickle, A.Cleasby, L.A.Devine, H.Jhoti
compound		source
Molecule: Mitogen-Activated Protein Kinase 14 Chain: A Fragment: Kinase Domain, Residues 1-360 Synonym: Mitogen-Activated Protein Kinase P38alpha, Map Kinase P38alpha, Cytokine Suppressive Anti-Inflammatory Drug Binding Protein, Csaid Binding Protein, Csbp, Max-Interacting Protein 2, Map Kinase Mxi2, Sapk2a; Ec: 2.7.1.37 Engineered: Yes		Organism_scientific: Homo Sapiens Organism_common: Human Organism_taxid: 9606 Expression_system: Escherichia Coli Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3)
symmetry	Space Group: P 21 21 21	R_factor 0.197 R_Free 0.273
crystal cell	length a length b length c angle alpha angle beta angle gamma 45.291 86.025 126.587 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.41 Å
ligand	LI4 BindingDB	enzyme	Transferase E.C.2.7.1.37 BRENDA
Gene Ontology	Chain Function Process Component A
Primary reference	Identification of novel p38alpha MAP kinase inhibitors using fragment-based lead generation., Gill AL, Frederickson M, Cleasby A, Woodhead SJ, Carr MG, Woodhead AJ, Walker MT, Congreve MS, Devine LA, Tisi D, O'Reilly M, Seavers LC, Davis DJ, Curry J, Anthony R, Padova A, Murray CW, Carr RA, Jhoti H, J Med Chem. 2005 Jan 27;48(2):414-26. PMID:15658855

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (68 Kb) [Save to disk] Biological Unit Coordinates (1wbw.pdb1.gz) 63 Kb LPC: Ligand-Protein Contacts for 1WBW CSU: Contacts of Structural Units for 1WBW Likely Quarternary Molecular Structure file(s) for 1WBW Retrieve 1WBW in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WBW from S2C, [Save to disk]

View 1WBW in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WBW

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WBW, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wbw] [1wbw_A] SWISS-PROT database: [Q16539] Domain organization of [MK14_HUMAN] by SWISSPFAM Domain found in 1WBW: [S_TKc ] by SMART

Other resources with information on 1WBW

Community annotation for 1WBW at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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