1WDX Contractile Protein date May 19, 2004
title Yeast Bbc1 Sh3 Domain, Triclinic Crystal Form
authors M.Wilmanns, L.Consani Textor, P.Kursula, I.Kursula, F.Lehmann, Y.
compound source
Molecule: Myosin Tail Region-Interacting Protein Mti1
Chain: A, B, C, D
Fragment: Sh3 Domain
Synonym: Bbc1 Protein
Engineered: Yes
 Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pdest17
symmetry Space Group: P 1
R_factor 0.263 R_Free 0.326
crystal
cell
length a length b length c angle alpha angle beta angle gamma
28.730 44.770 51.120 89.83 83.37 85.41
method X-Ray Diffractionresolution 2.50 Å
related structures by homologous chain: 1TG0
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (1wdx.pdb1.gz) 11 Kb
  • Biological Unit Coordinates (1wdx.pdb2.gz) 11 Kb
  • Biological Unit Coordinates (1wdx.pdb3.gz) 11 Kb
  • Biological Unit Coordinates (1wdx.pdb4.gz) 11 Kb
  • CSU: Contacts of Structural Units for 1WDX
  • Likely Quarternary Molecular Structure file(s) for 1WDX
  • Structure Factors (86 Kb)
  • Retrieve 1WDX in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WDX from S2C, [Save to disk]
  • Re-refined 1wdx structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1WDX in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WDX
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WDX, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wdx_C] [1wdx] [1wdx_A] [1wdx_D] [1wdx_B]
  • SWISS-PROT database: [P47068]
  • Domain organization of [BBC1_YEAST] by SWISSPFAM
  • Domain found in 1WDX: [SH3 ] by SMART
    • Other resources with information on 1WDX
  • Community annotation for 1WDX at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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