1WF8 Protein Binding date May 26, 2004
title Solution Structure Of The Pdz Domain Of Spinophilinneurabin
authors X.Qin, F.Hayashi, S.Yokoyama, Riken Structural Genomicsproteom Initiative (Rsgi)
compound source
Molecule: Neurabin-I
Chain: A
Fragment: Pdz Domain
Synonym: Spinophilinneurabinii, Neural Tissue-Specific F-A Binding Protein I;
Engineered: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Kazusa Cnda Fh03567
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P021030-40
Other_details: Cell Free Protein Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (517 Kb) [Save to disk]
  • Biological Unit Coordinates (1wf8.pdb1.gz) 26 Kb
  • CSU: Contacts of Structural Units for 1WF8
  • Original NMR restraints for 1WF8 from PDB
  • Retrieve 1WF8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WF8 from S2C, [Save to disk]
    • View 1WF8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WF8
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WF8, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wf8_A] [1wf8]
  • SWISS-PROT database: [Q9ULJ8]
  • Domain organization of [NEB1_HUMAN] by SWISSPFAM
  • Domain found in 1WF8: [PDZ ] by SMART
    • Other resources with information on 1WF8
  • Community annotation for 1WF8 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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