1WG0 Protein Binding date May 27, 2004
title Structural Comparison Of Nas6p Protein Structures In Two Dif Crystal Forms
authors Y.Nakamura, T.Umehara, A.Tanaka, M.Horikoshi, S.Yokoyama, B.Padma Riken Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Probable 26s Proteasome Regulatory Subunit P28
Chain: A
Synonym: Proteasome Non-Atpase Subunit 6, Nas6p
Engineered: Yes
 Organism_scientific: Saccharomyces Cerevisiae
Organism_common: Baker'S Yeast
Organism_taxid: 4932
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28b-Nas6p
symmetry Space Group: P 1 21 1
R_factor 0.179 R_Free 0.250
crystal
cell
length a length b length c angle alpha angle beta angle gamma
43.444 68.629 46.985 90.00 108.95 90.00
method X-Ray Diffractionresolution 2.53 Å
related structures by homologous chain: 1IXV
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (1wg0.pdb1.gz) 42 Kb
  • CSU: Contacts of Structural Units for 1WG0
  • Likely Quarternary Molecular Structure file(s) for 1WG0
  • Retrieve 1WG0 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WG0 from S2C, [Save to disk]
    • View 1WG0 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WG0
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WG0, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wg0] [1wg0_A]
  • SWISS-PROT database: [P50086]
  • Domain organization of [PSD10_YEAST] by SWISSPFAM
  • Domain found in 1WG0: [ANK ] by SMART
    • Other resources with information on 1WG0
  • Community annotation for 1WG0 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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