1WG8 Transferase date May 27, 2004
title Crystal Structure Of A Predicted S-Adenosylmethionine-Depend Methyltransferase Tt1512 From Thermus Thermophilus Hb8.
authors S.Kishishita, K.Murayama, M.Shirouzu, S.Yokoyama, Riken Structur Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Predicted S-Adenosylmethionine-Dependent Methyltr
Chain: A, B
Ec: 2.1.1.-
Engineered: Yes
Organism_scientific: Thermus Thermophilus
Organism_taxid: 274
Gene: Tt1512
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet11b
symmetry Space Group: P 21 21 21
R_factor 0.216 R_Free 0.263
crystal
cell
length a length b length c angle alpha angle beta angle gamma
68.054 88.909 104.130 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.00 Å
ligand SAM enzyme Transferase E.C.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (96 Kb) [Save to disk]
  • Biological Unit Coordinates (1wg8.pdb1.gz) 48 Kb
  • Biological Unit Coordinates (1wg8.pdb2.gz) 46 Kb
  • LPC: Ligand-Protein Contacts for 1WG8
  • CSU: Contacts of Structural Units for 1WG8
  • Likely Quarternary Molecular Structure file(s) for 1WG8
  • Retrieve 1WG8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WG8 from S2C, [Save to disk]
  • View 1WG8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WG8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WG8, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1wg8a1, region A:109-206 [Jmol] [rasmolscript] [script source]
        - Domain d1wg8a2, region A:5-108,A:207-284 [Jmol] [rasmolscript] [script source]
        - Domain d1wg8b1, region B:109-206 [Jmol] [rasmolscript] [script source]
        - Domain d1wg8b2, region B:5-108,B:207-284 [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wg8_A] [1wg8] [1wg8_B]
  • SWISS-PROT database: [Q5SJD8]
  • Domain organization of [MRAW_THET8] by SWISSPFAM
  • Other resources with information on 1WG8
  • Community annotation for 1WG8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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