1WHI Ribosomal Protein date Jan 10, 1996
title Ribosomal Protein L14
authors C.Davies, S.W.White, V.Ramakrishnan
compound source
Molecule: Ribosomal Protein L14
Chain: A
Engineered: Yes
Organism_scientific: Geobacillus Stearothermophilus
Organism_taxid: 1422
Cell_line: Bl21
Gene: Bacillus Stearothermophilus
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_vector_type: Bacterial
Expression_system_plasmid: Pet13
Expression_system_gene: Bacillus Stearothermophilus (Access P04450);
Other_details: T7 Expression System Inducible By Isopropyl- Thiogalactopyranoside (Iptg)
symmetry Space Group: C 1 2 1
R_factor 0.189 R_Free 0.255
crystal
cell
length a length b length c angle alpha angle beta angle gamma
66.900 32.700 49.400 90.00 101.80 90.00
method X-Ray Diffractionresolution 1.50 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe crystal structure of ribosomal protein L14 reveals an important organizational component of the translational apparatus., Davies C, White SW, Ramakrishnan V, Structure 1996 Jan 15;4(1):55-66. PMID:8805509
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (25 Kb) [Save to disk]
  • Biological Unit Coordinates (1whi.pdb1.gz) 41 Kb
  • CSU: Contacts of Structural Units for 1WHI
  • Likely Quarternary Molecular Structure file(s) for 1WHI
  • Retrieve 1WHI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WHI from S2C, [Save to disk]
  • View 1WHI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1WHI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Conformational Epitope Prediction for 1WHI from the CEP Server.
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WHI, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1whi__, region [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1whi_A] [1whi]
  • SWISS-PROT database: [P04450]
  • Domain organization of [RL14_BACST] by SWISSPFAM
  • Domain found in 1WHI: [Ribosomal_L14 ] by SMART
  • Other resources with information on 1WHI
  • Community annotation for 1WHI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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