1WI4 Protein Binding date May 28, 2004
title Solution Structure Of The Pdz Domain Of Syntaxin Binding Pro
authors H.Endo, T.Tomizawa, T.Kigawa, M.Yoshida, F.Hayashi, S.Yokoyama, Ri Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Syntaxin Binding Protein 4
Chain: A
Fragment: Pdz Domain
Synonym: Synip
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Riken Cdna 2700027c09
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P030203-50
Other_details: Cell Free Synthesis
methodSolution NMR
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (550 Kb) [Save to disk]
  • Biological Unit Coordinates (1wi4.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1WI4
  • Original NMR restraints for 1WI4 from PDB
  • Retrieve 1WI4 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WI4 from S2C, [Save to disk]
    • View 1WI4 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WI4
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WI4, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wi4] [1wi4_A]
  • SWISS-PROT database: [Q9WV89]
  • Domain organization of [STXB4_MOUSE] by SWISSPFAM
  • Domain found in 1WI4: [PDZ ] by SMART
    • Other resources with information on 1WI4
  • Community annotation for 1WI4 at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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