1WOY	Ligase	date	Aug 27, 2004
title	Crystal Structure Of Methionyl Trna Synthetase Y225f Mutant Thermus Thermophilus
authors	M.Konno, R.Takeda, O.Nureki, S.Yokoyama, Riken Structural Genomicsproteomics Initiative (Rsgi)
compound		source
Molecule: Methionyl-Trna Synthetase Chain: A Fragment: Residues 1-500 Synonym: Metrs Ec: 6.1.1.10 Engineered: Yes Mutation: Yes		Organism_scientific: Thermus Thermophilus Organism_taxid: 274 Expression_system: Escherichia Coli Bl21(De3) Expression_system_taxid: 469008 Expression_system_strain: Bl21(De3) Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet-26b(+)
symmetry	Space Group: P 21 21 21	R_factor 0.189 R_Free 0.226
crystal cell	length a length b length c angle alpha angle beta angle gamma 64.416 82.731 141.405 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	2.00 Å
ligand	ZN	enzyme	Ligase E.C.6.1.1.10 BRENDA
Gene Ontology	Chain Function Process Component A

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (93 Kb) [Save to disk] Biological Unit Coordinates (1woy.pdb1.gz) 89 Kb LPC: Ligand-Protein Contacts for 1WOY CSU: Contacts of Structural Units for 1WOY Likely Quarternary Molecular Structure file(s) for 1WOY Structure Factors (398 Kb) Retrieve 1WOY in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WOY from S2C, [Save to disk] Re-refined 1woy structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models

View 1WOY in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WOY

Ramachandran plot from PDBSum

Structure-derived information

Electron Density related parameters from EDS Electron Density Server, at Upsala Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WOY, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1woy_A] [1woy] SWISS-PROT database: [P23395] Domain organization of [SYM_THET8] by SWISSPFAM

Other resources with information on 1WOY

Community annotation for 1WOY at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

Movements, Movies and Images

Images from IMB Jena Image Library of Biological Macromolecules.

You may enter another PDB ID code

Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]

---

OCA© by Jaime Prilusky, 1996-2014,2022 Bioinformatics Unit Weizmann Institute of Science

---