1WRG Membrane Protein date Oct 15, 2004
title Light-Harvesting Complex 1 Beta Subunit From Wild-Type Rhodo Rubrum
authors Z.Y.Wang, K.Gokan, M.Kobayashi, T.Nozawa
compound source
Molecule: Light-Harvesting Protein B-880, Beta Chain
Chain: A
Synonym: Lh-1; Antenna Pigment Protein, Beta Chain
 Organism_scientific: Rhodospirillum Rubrum
Organism_taxid: 1085
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution Structures of the Core Light-harvesting alpha and beta Polypeptides from Rhodospirillum rubrum: Implications for the Pigment-Protein and Protein-Protein Interactions., Wang ZY, Gokan K, Kobayashi M, Nozawa T, J Mol Biol 2005 Mar 25;347(2):465-77. Epub 2005 Jan 25. PMID:15740753
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (148 Kb) [Save to disk]
  • Biological Unit Coordinates (1wrg.pdb1.gz) 15 Kb
  • CSU: Contacts of Structural Units for 1WRG
  • Original NMR restraints for 1WRG from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1WRG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WRG from S2C, [Save to disk]
    • View 1WRG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WRG
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WRG, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wrg] [1wrg_A]
  • SWISS-PROT database: [Q2RQ23] [P0C190]
  • Domain organization of [LHB_RHORT] [LHB_RHORU] by SWISSPFAM
    • Other resources with information on 1WRG
  • Community annotation for 1WRG at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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