1WRU Structural Protein date Oct 27, 2004
title Structure Of Central Hub Elucidated By X-Ray Analysis Of Gen 44; Baseplate Component Of Bacteriophage Mu
authors Y.Kondou, D.Kitazawa, S.Takeda, E.Yamashita, M.Mizuguchi, K.Kawan T.Tsukihara
compound source
Molecule: 43 Kda Tail Protein
Chain: A
Synonym: Gpp, Gene Product 44
Engineered: Yes
 Organism_scientific: Enterobacteria Phage Mu
Organism_taxid: 10677
Gene: 44
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Bl21(De3)Plyss
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet17b
symmetry Space Group: H 3
R_factor 0.222 R_Free 0.249
crystal
cell
length a length b length c angle alpha angle beta angle gamma
126.562 126.562 64.214 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.10 Å
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (59 Kb) [Save to disk]
  • Biological Unit Coordinates (1wru.pdb1.gz) 160 Kb
  • CSU: Contacts of Structural Units for 1WRU
  • Likely Quarternary Molecular Structure file(s) for 1WRU
  • Structure Factors (210 Kb)
  • Retrieve 1WRU in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WRU from S2C, [Save to disk]
  • Re-refined 1wru structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1WRU in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WRU
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WRU, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wru_A] [1wru]
  • SWISS-PROT database: [P08558]
  • Domain organization of [VPP_BPMU] by SWISSPFAM
    • Other resources with information on 1WRU
  • Community annotation for 1WRU at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

    • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science