1WUI	Oxidoreductase	date	Dec 07, 2004
title	Ultra-High Resolution Structure Of The Ni-A State Of [Nife]H From Desulufovibrio Vulgaris Miyazaki F
authors	H.Ogata, S.Hirota, A.Nakahara, H.Komori, N.Shibata, T.Kato, K.Kano Y.Higuchi
compound		source
Molecule: Periplasmic [Nife] Hydrogenase Small Subunit Chain: S Synonym: Nife Hydrogenlyase Small Chain Ec: 1.12.2.1		Organism_scientific: Desulfovibrio Vulgaris Str. 'Miyazaki Organism_taxid: 883 Strain: Miyazaki F
Molecule: Periplasmic [Nife] Hydrogenase Large Subunit Chain: L Fragment: Residues 19-552 Synonym: Nife Hydrogenlyase Large Chain Ec: 1.12.2.1		Organism_scientific: Desulfovibrio Vulgaris Str. 'Miyazaki Organism_taxid: 883 Strain: Miyazaki F
symmetry	Space Group: P 21 21 21	R_factor R_Free
crystal cell	length a length b length c angle alpha angle beta angle gamma 98.069 125.966 66.380 90.00 90.00 90.00
method	X-Ray Diffraction	resolution	1.04 Å
ligand	CSO, F3S, MG, MPD, MRD, NFC, SF4	enzyme	Oxidoreductase E.C.1.12.2.1 BRENDA
note	1WUI is a representative structure
Gene Ontology	Chain Function Process Component L S
Primary reference	Activation process of [NiFe] hydrogenase elucidated by high-resolution X-Ray analyses: conversion of the ready to the unready state., Ogata H, Hirota S, Nakahara A, Komori H, Shibata N, Kato T, Kano K, Higuchi Y, Structure. 2005 Nov;13(11):1635-42. PMID:16271886

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (301 Kb) [Save to disk] Biological Unit Coordinates (1wui.pdb1.gz) 295 Kb LPC: Ligand-Protein Contacts for 1WUI CSU: Contacts of Structural Units for 1WUI Likely Quarternary Molecular Structure file(s) for 1WUI Retrieve 1WUI in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1WUI from S2C, [Save to disk]

View 1WUI in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1WUI

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1WUI, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1wui_L] [1wui] [1wui_S] SWISS-PROT database: [P21852] [P21853] Domain organization of [PHNL_DESVM] [PHNS_DESVM] by SWISSPFAM

Other resources with information on 1WUI

Community annotation for 1WUI at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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