1WWC Transferase date Apr 30, 1999
title Nt3 Binding Domain Of Human Trkc Receptor
authors M.H.Ultsch, C.Wiesmann, L.C.Simmons, J.Henrich, M.Yang, D.Reilly, A.M.De Vos
compound source
Molecule: Protein (Nt-3 Growth Factor Receptor Trkc)
Chain: A
Fragment: Ligand Binding Domain
Engineered: Yes
Mutation: Yes
 Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 32 2 1
R_factor 0.187 R_Free 0.288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
82.900 82.900 30.400 90.00 90.00 120.00
method X-Ray Diffractionresolution 1.90 Å
note 1WWC is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceCrystal structures of the neurotrophin-binding domain of TrkA, TrkB and TrkC., Ultsch MH, Wiesmann C, Simmons LC, Henrich J, Yang M, Reilly D, Bass SH, de Vos AM, J Mol Biol 1999 Jul 2;290(1):149-59. PMID:10388563
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (24 Kb) [Save to disk]
  • Biological Unit Coordinates (1wwc.pdb1.gz) 20 Kb
  • Biological Unit Coordinates (1wwc.pdb2.gz) 39 Kb
  • CSU: Contacts of Structural Units for 1WWC
  • Likely Quarternary Molecular Structure file(s) for 1WWC
  • Retrieve 1WWC in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WWC from S2C, [Save to disk]
    • View 1WWC in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WWC
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WWC, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1wwca_, region A [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wwc] [1wwc_A]
  • SWISS-PROT database: [Q16288]
  • Domain organization of [NTRK3_HUMAN] by SWISSPFAM
    • Other resources with information on 1WWC
  • Community annotation for 1WWC at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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