1WXA Cell Adhesion date Jan 20, 2005
title Solution Structure Of Ras-Binding Domain In Mouse Af-6 Prote
authors C.Zhao, T.Tomizawa, S.Koshiba, M.Inoue, T.Kigawa, S.Yokoyama, Rike Structural Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Afadin
Chain: A
Fragment: Ras-Binding Domain
Synonym: Af-6 Protein
Engineered: Yes
 Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Riken Cdna 4932441d06
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040719-08
Other_details: Cell-Free Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (588 Kb) [Save to disk]
  • Biological Unit Coordinates (1wxa.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 1WXA
  • Retrieve 1WXA in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1WXA from S2C, [Save to disk]
    • View 1WXA in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1WXA
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1WXA, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1wxa_A] [1wxa]
  • SWISS-PROT database: [Q9QZQ1]
  • Domain organization of [AFAD_MOUSE] by SWISSPFAM
  • Domain found in 1WXA: [RA ] by SMART
    • Other resources with information on 1WXA
  • Community annotation for 1WXA at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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