1X1Z	Lyase	date	Apr 15, 2005
title	Orotidine 5'-Monophosphate Decarboxylase (Odcase) Complexed (Produced From 6-Cyanoump)
authors	M.Fujihashi, A.M.Bello, E.Poduch, L.Wei, S.C.Annedi, E.F.Pai, L.P.
compound		source
Molecule: Orotidine 5'-Phosphate Decarboxylase Chain: A, B Fragment: Residues 1-225 Synonym: Omp Decarboxylase, Ompdcase, Ompdecase Ec: 4.1.1.23 Engineered: Yes Mutation: Yes		Organism_scientific: Methanothermobacter Thermautotrophicus Organism_taxid: 145262 Expression_system: Escherichia Coli Expression_system_taxid: 562 Expression_system_vector_type: Plasmid Expression_system_plasmid: Pet15b
symmetry	Space Group: P 1 21 1	R_factor 0.162 R_Free 0.180
crystal cell	length a length b length c angle alpha angle beta angle gamma 58.105 73.568 59.399 90.00 119.28 90.00
method	X-Ray Diffraction	resolution	1.45 Å
ligand	BMP, GOL	enzyme	Lyase E.C.4.1.1.23 BRENDA
Gene Ontology	Chain Function Process Component A, B
Primary reference	An unprecedented twist to ODCase catalytic activity., Fujihashi M, Bello AM, Poduch E, Wei L, Annedi SC, Pai EF, Kotra LP, J Am Chem Soc 2005 Nov 2;127(43):15048-50. PMID:16248642

Data retrieval

Asymmetric unit, PDB entry: [header only] [complete with coordinates] (81 Kb) [Save to disk] Biological Unit Coordinates (1x1z.pdb1.gz) 74 Kb LPC: Ligand-Protein Contacts for 1X1Z CSU: Contacts of Structural Units for 1X1Z Likely Quarternary Molecular Structure file(s) for 1X1Z Retrieve 1X1Z in mmCIF format [Save to disk] SEQRES to COORDINATES correlation for 1X1Z from S2C, [Save to disk]

View 1X1Z in 3D

Proteopedia, because life has more than 2D. On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure. On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.

Visual 3D analysis of 1X1Z

Ramachandran plot from PDBSum

Structure-derived information

Dipole moment, from Dipole Server at Weizmann Institute 3D motif for 1X1Z, from MSDmotif at EBI

Sequence-derived information

View one-letter amino acid or nucleotide sequence for each chain: [1x1z] [1x1z_A] [1x1z_B] SWISS-PROT database: [O26232] Domain organization of [PYRF_METTH] by SWISSPFAM Domain found in 1X1Z: [OMPdecase ] by SMART

Other resources with information on 1X1Z

Community annotation for 1X1Z at PDBWiki (http://pdbwiki.org) MMDB (Entrez's Structure Database)

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