1X22 Antibiotic date Apr 18, 2005
title Solution Structure Of A Novel Moricin Analogue, An Antibacte Peptide From A Lepidopteran Insect, Spodoptera Litura
authors Y.Oizumi, H.Hemmi, M.Minami, A.Asaoka, M.Yamakawa
compound source
Molecule: Moricin
Chain: A
Synonym: Sl Moricin
Engineered: Yes
 Synthetic: Yes
Organism_scientific: Spodoptera Litura
Organism_taxid: 69820
Other_details: This Sequence Occurs Naturally In A Lepidopt Insect
methodSolution NMR
note 1X22 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceIsolation, gene expression and solution structure of a novel moricin analogue, antibacterial peptide from a lepidopteran insect, Spodoptera litura., Oizumi Y, Hemmi H, Minami M, Asaoka A, Yamakawa M, Biochim Biophys Acta 2005 Aug 31;1752(1):83-92. PMID:16115804
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (226 Kb) [Save to disk]
  • Biological Unit Coordinates (1x22.pdb1.gz) 12 Kb
  • CSU: Contacts of Structural Units for 1X22
  • Original NMR restraints for 1X22 from PDB
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1X22 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X22 from S2C, [Save to disk]
    • View 1X22 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1X22
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1X22, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x22_A] [1x22]
  • SWISS-PROT database: [Q7YZB4]
  • Belongs to the membrane permeabilizing peptide, moricin (moricin) family according to TCDB.
  • Domain organization of [Q7YZB4_SPOLT] by SWISSPFAM
    • Other resources with information on 1X22
  • Community annotation for 1X22 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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