1X4Y Cell Adhesion date May 15, 2005
title Solution Structure Of The 3rd Fibronectin Type III Domain Fr Biregional Cell Adhesion Molecule-Relateddown-Regulated On (Cdon) Binding Protein
authors T.Tomizawa, T.Kigawa, S.Koshiba, M.Inoue, S.Yokoyama, Riken Struc Genomicsproteomics Initiative (Rsgi)
compound source
Molecule: Biregional Cell Adhesion Molecule-Relateddown-Re Oncogenes (Cdon)Binding Protein;
Chain: A
Fragment: Fibronectin Type III (Fn3) Domain
Engineered: Yes
Organism_scientific: Mus Musculus
Organism_common: House Mouse
Organism_taxid: 10090
Gene: Boc
Expression_system_vector_type: Plasmid
Expression_system_plasmid: P040719-12
Other_details: Cell-Free Protein Synthesis
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (575 Kb) [Save to disk]
  • Biological Unit Coordinates (1x4y.pdb1.gz) 29 Kb
  • CSU: Contacts of Structural Units for 1X4Y
  • Original NMR restraints for 1X4Y from PDB
  • Retrieve 1X4Y in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1X4Y from S2C, [Save to disk]
  • View 1X4Y in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1X4Y
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1X4Y, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1x4y] [1x4y_A]
  • SWISS-PROT database: [Q6AZB0]
  • Domain organization of [BOC_MOUSE] by SWISSPFAM
  • Domain found in 1X4Y: [FN3 ] by SMART
  • Other resources with information on 1X4Y
  • Community annotation for 1X4Y at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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