1XE1 Structural Genomics, Unknown Function date Sep 08, 2004
title Hypothetical Protein From Pyrococcus Furiosus Pfu-880080-001
authors J.C.Chang, M.Zhao, W.Zhou, Z.J.Liu, W.Tempel, W.B.Arendall Iii, L. D.Lee, J.E.Habel, J.P.Rose, J.S.Richardson, D.C.Richardson, B.C. Southeast Collaboratory For Structural Genomics (Secsg)
compound source
Molecule: Hypothetical Protein Pf0907
Chain: A
Engineered: Yes
 Organism_scientific: Pyrococcus Furiosus
Organism_taxid: 2261
Expression_system: Escherichia Coli
Expression_system_taxid: 562
symmetry Space Group: P 65 2 2
R_factor 0.221 R_Free 0.240
crystal
cell
length a length b length c angle alpha angle beta angle gamma
88.625 88.625 73.267 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.00 Å
ligand MSE, SO4 enzyme
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (19 Kb) [Save to disk]
  • Biological Unit Coordinates (1xe1.pdb1.gz) 15 Kb
  • Biological Unit Coordinates (1xe1.pdb2.gz) 29 Kb
  • Biological Unit Coordinates (1xe1.pdb3.gz) 29 Kb
  • LPC: Ligand-Protein Contacts for 1XE1
  • CSU: Contacts of Structural Units for 1XE1
  • Likely Quarternary Molecular Structure file(s) for 1XE1
  • Structure Factors (83 Kb)
  • Retrieve 1XE1 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XE1 from S2C, [Save to disk]
  • Re-refined 1xe1 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1XE1 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1XE1
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XE1, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xe1a_, region A [Jmol] [rasmolscript] [script source]
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xe1] [1xe1_A]
  • SWISS-PROT database: [Q8U2D2]
  • Domain organization of [Q8U2D2_PYRFU] by SWISSPFAM
    • Other resources with information on 1XE1
  • Community annotation for 1XE1 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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