1XEG Lyase date Sep 10, 2004
title Crystal Structure Of Human Carbonic Anhydrase II Complexed W Acetate Ion
authors P.A.Mazumdar, D.Kumaran, A.K.Das, S.Swaminathan
compound source
Molecule: Carbonic Anhydrase II
Chain: A
Synonym: Carbonate Dehydratase II, Ca-II, Carbonic Anhydras
Ec: 4.2.1.1
Engineered: Yes
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Gene: Ca2
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
symmetry Space Group: P 21 21 21
R_factor 0.180 R_Free 0.210
crystal
cell
length a length b length c angle alpha angle beta angle gamma
42.312 71.749 74.010 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.81 Å
ligand ACT, ZN enzyme Lyase E.C.4.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceA novel acetate-bound complex of human carbonic anhydrase II., Mazumdar PA, Kumaran D, Swaminathan S, Das AK, Acta Crystallogr Sect F Struct Biol Cryst Commun. 2008 Mar 1;64(Pt, 3):163-6. Epub 2008 Feb 23. PMID:18323598
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (49 Kb) [Save to disk]
  • Biological Unit Coordinates (1xeg.pdb1.gz) 45 Kb
  • LPC: Ligand-Protein Contacts for 1XEG
  • CSU: Contacts of Structural Units for 1XEG
  • Likely Quarternary Molecular Structure file(s) for 1XEG
  • Structure Factors (157 Kb)
  • Retrieve 1XEG in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XEG from S2C, [Save to disk]
  • Re-refined 1xeg structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XEG in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XEG
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XEG, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xeg_A] [1xeg]
  • SWISS-PROT database: [P00918]
  • Domain organization of [CAH2_HUMAN] by SWISSPFAM
  • Domain found in 1XEG: [Carb_anhydrase ] by SMART
  • Other resources with information on 1XEG
  • Community annotation for 1XEG at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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