1XHE Transcription date Sep 18, 2004
title Crystal Structure Of The Receiver Domain Of Redox Response R Arca
authors A.Toro-Roman, T.R.Mack, A.M.Stock
compound source
Molecule: Aerobic Respiration Control Protein Arca
Chain: A, B
Fragment: Receiver Domain
Synonym: Redox Response Regulator Arca; Dye Resistance Prot
Engineered: Yes
Mutation: Yes
Organism_scientific: Escherichia Coli
Organism_taxid: 562
Gene: Arca, Dye, Fexa, Sfra, Seg, Msp, Cpxc
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: B834(De3)Plyss And Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pef29 (Pjes307 Derivative)
symmetry Space Group: P 65 2 2
R_factor 0.213 R_Free 0.256
crystal
cell
length a length b length c angle alpha angle beta angle gamma
86.695 86.695 214.710 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
related structures by homologous chain: 1XHF
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceStructural Analysis and Solution Studies of the Activated Regulatory Domain of the Response Regulator ArcA: A Symmetric Dimer Mediated by the alpha4-beta5-alpha5 Face., Toro-Roman A, Mack TR, Stock AM, J Mol Biol 2005 May 27;349(1):11-26. Epub 2005 Apr 7. PMID:15876365
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (45 Kb) [Save to disk]
  • Biological Unit Coordinates (1xhe.pdb1.gz) 40 Kb
  • CSU: Contacts of Structural Units for 1XHE
  • Likely Quarternary Molecular Structure file(s) for 1XHE
  • Structure Factors (126 Kb)
  • Retrieve 1XHE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XHE from S2C, [Save to disk]
  • Re-refined 1xhe structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XHE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XHE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XHE, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xhe_A] [1xhe] [1xhe_B]
  • SWISS-PROT database: [P0A9Q1]
  • Domain organization of [ARCA_ECOLI] by SWISSPFAM
  • Domain found in 1XHE: [REC ] by SMART
  • Other resources with information on 1XHE
  • Community annotation for 1XHE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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