1XKH Membrane Protein date Sep 29, 2004
title Pyoverdine Outer Membrane Receptor Fpva From Pseudomonas Aer Pao1 Bound To Pyoverdine
authors D.Cobessi, H.Celia, N.Folschweiller, I.J.Schalk, M.A.Abdallah, F.
compound source
Molecule: Ferripyoverdine Receptor
Chain: A, B, C
Fragment: Residues 129-815
Synonym: Pyoverdine Outer Membrane Receptor, Selenomethioni Substituted Protein;
Engineered: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
Gene: Fpva
Expression_system: Pseudomonas Aeruginosa
Expression_system_taxid: 287
Expression_system_strain: Pao503
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pvr2

Molecule: Pyoverdin C-E
Chain: I, J, K
Engineered: Yes

Synthetic: Yes
Organism_scientific: Pseudomonas Aeruginosa
Organism_taxid: 287
symmetry Space Group: C 1 2 1
R_factor 0.259 R_Free 0.288
crystal
cell
length a length b length c angle alpha angle beta angle gamma
137.451 231.342 121.695 90.00 104.57 90.00
method X-Ray Diffractionresolution 3.60 Å
ligand DSN, FHO, MSE, PVE, SO4 enzyme
Gene
Ontology
ChainFunctionProcessComponent
A, C, B


Primary referenceThe crystal structure of the pyoverdine outer membrane receptor FpvA from Pseudomonas aeruginosa at 3.6 angstroms resolution., Cobessi D, Celia H, Folschweiller N, Schalk IJ, Abdallah MA, Pattus F, J Mol Biol. 2005 Mar 18;347(1):121-34. Epub 2005 Jan 21. PMID:15733922
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (343 Kb) [Save to disk]
  • Biological Unit Coordinates (1xkh.pdb1.gz) 115 Kb
  • Biological Unit Coordinates (1xkh.pdb2.gz) 115 Kb
  • Biological Unit Coordinates (1xkh.pdb3.gz) 116 Kb
  • LPC: Ligand-Protein Contacts for 1XKH
  • CSU: Contacts of Structural Units for 1XKH
  • Likely Quarternary Molecular Structure file(s) for 1XKH
  • Structure Factors (366 Kb)
  • Retrieve 1XKH in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XKH from S2C, [Save to disk]
  • Re-refined 1xkh structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XKH in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XKH
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XKH, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xkh_B] [1xkh_I] [1xkh_J] [1xkh_A] [1xkh] [1xkh_K] [1xkh_C]
  • SWISS-PROT database: [P48632]
  • Belongs to the outer membrane receptor (omr) family according to TCDB.
  • Domain organization of [FPVA_PSEAE] by SWISSPFAM
  • Other resources with information on 1XKH
  • Community annotation for 1XKH at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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