1XLI Isomerase(Intramolecular Oxidoreductase) date Oct 09, 1991
title Mechanism For Aldose-Ketose Interconversion By D-Xylose Isom Involving Ring Opening Followed By A 1,2-Hydride Shift
authors C.A.Collyer, K.Henrick, D.M.Blow
compound source
Molecule: D-Xylose Isomerase
Chain: A, B
Ec: 5.3.1.5
Engineered: Yes
Organism_scientific: Arthrobacter Sp.
Organism_taxid: 1669
Strain: Nrrl B3728
symmetry Space Group: P 31 2 1
R_factor
R_Free NULL
crystal
cell
length a length b length c angle alpha angle beta angle gamma
105.800 105.800 153.200 90.00 90.00 120.00
method X-Ray Diffractionresolution 2.50 Å
ligand GLT, MN enzyme Isomerase E.C.5.3.1.5 BRENDA
related structures by homologous chain: 1DID, 6XIM
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceMechanism for aldose-ketose interconversion by D-xylose isomerase involving ring opening followed by a 1,2-hydride shift., Collyer CA, Henrick K, Blow DM, J Mol Biol 1990 Mar 5;212(1):211-35. PMID:2319597
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (136 Kb) [Save to disk]
  • Biological Unit Coordinates (1xli.pdb1.gz) 259 Kb
  • LPC: Ligand-Protein Contacts for 1XLI
  • CSU: Contacts of Structural Units for 1XLI
  • Likely Quarternary Molecular Structure file(s) for 1XLI
  • Retrieve 1XLI in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XLI from S2C, [Save to disk]
  • View 1XLI in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XLI
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XLI, from MSDmotif at EBI
  • Genome occurence of 1XLI's fold from GeneCensus
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xlia_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1xlib_, region B [Jmol] [rasmolscript] [script source]
  • Class (fold), Architecture (subfold), Topology, Homologous superfamily from CATH
  • Summaries and structural analyses of PDB data files from PDBSum
  • Identification of Protein Pockets & Cavities at CASTp
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xli_A] [1xli] [1xli_B]
  • SWISS-PROT database: [P12070]
  • Domain organization of [XYLA_ARTS7] by SWISSPFAM
  • Other resources with information on 1XLI
  • Community annotation for 1XLI at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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