1XMZ Luminescent Protein date Oct 04, 2004
title Crystal Structure Of The Dark State Of Kindling Fluorescent Kfp From Anemonia Sulcata
authors M.L.Quillin, D.M.Anstrom, X.Shu, S.O'Leary, K.Kallio, D.M.Chudako S.J.Remington
compound source
Molecule: Gfp-Like Non-Fluorescent Chromoprotein Fp595 Chai
Chain: A, B
Engineered: Yes
Organism_scientific: Anemonia Sulcata
Organism_common: Snake-Locks Sea Anemone
Organism_taxid: 6108
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm-109
Expression_system_vector_type: Plasmid
Expression_system_vector: Plasmid
Expression_system_plasmid: Pqe-30

Molecule: Gfp-Like Non-Fluorescent Chromoprotein Fp595 Chai
Chain: C, D
Engineered: Yes
Mutation: Yes

Organism_scientific: Anemonia Sulcata
Organism_common: Snake-Locks Sea Anemone
Organism_taxid: 6108
Expression_system: Escherichia Coli
Expression_system_taxid: 562
Expression_system_strain: Jm-109
Expression_system_vector_type: Plasmid
Expression_system_vector: Plasmid
Expression_system_plasmid: Pqe-30
symmetry Space Group: C 2 2 21
R_factor
R_Free
crystal
cell
length a length b length c angle alpha angle beta angle gamma
76.520 125.400 92.750 90.00 90.00 90.00
method X-Ray Diffractionresolution 1.38 Å
ligand BME, CRK, NH2 enzyme
related structures by homologous chain: 1XQM
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceKindling fluorescent protein from Anemonia sulcata: dark-state structure at 1.38 A resolution., Quillin ML, Anstrom DM, Shu X, O'Leary S, Kallio K, Chudakov DM, Remington SJ, Biochemistry. 2005 Apr 19;44(15):5774-87. PMID:15823036
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (180 Kb) [Save to disk]
  • Biological Unit Coordinates (1xmz.pdb1.gz) 347 Kb
  • LPC: Ligand-Protein Contacts for 1XMZ
  • CSU: Contacts of Structural Units for 1XMZ
  • Likely Quarternary Molecular Structure file(s) for 1XMZ
  • Structure Factors (862 Kb)
  • Retrieve 1XMZ in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XMZ from S2C, [Save to disk]
  • Re-refined 1xmz structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XMZ in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XMZ
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XMZ, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xmz_A] [1xmz_D] [1xmz_C] [1xmz_B] [1xmz]
  • SWISS-PROT database: [Q9GZ28]
  • Domain organization of [NFCP_ANESU] by SWISSPFAM
  • Other resources with information on 1XMZ
  • Community annotation for 1XMZ at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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