1XSE Oxidoreductase date Oct 19, 2004
title Crystal Structure Of Guinea Pig 11beta-Hydroxysteroid Dehydr Type 1
authors D.Ogg, B.Elleby, C.Norstrom, K.Stefansson, L.Abrahmsen, U.Opperma S.Svensson
compound source
Molecule: 11beta-Hydroxysteroid Dehydrogenase Type 1
Chain: A, B
Fragment: Catalytic Domain
Ec: 1.1.1.146
Engineered: Yes
Organism_scientific: Cavia Porcellus
Organism_common: Domestic Guinea Pig
Organism_taxid: 10141
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet28a
symmetry Space Group: I 4 2 2
R_factor 0.192 R_Free 0.267
crystal
cell
length a length b length c angle alpha angle beta angle gamma
118.385 118.385 184.772 90.00 90.00 90.00
method X-Ray Diffractionresolution 2.50 Å
ligand NDP enzyme Oxidoreductase E.C.1.1.1.146 BRENDA
related structures by homologous chain: 1Y5M, 1Y5R
Gene
Ontology
ChainFunctionProcessComponent
A, B


Primary referenceThe crystal structure of guinea pig 11beta-hydroxysteroid dehydrogenase type 1 provides a model for enzyme-lipid bilayer interactions., Ogg D, Elleby B, Norstrom C, Stefansson K, Abrahmsen L, Oppermann U, Svensson S, J Biol Chem 2005 Feb 4;280(5):3789-94. Epub 2004 Nov 12. PMID:15542590
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (97 Kb) [Save to disk]
  • Biological Unit Coordinates (1xse.pdb1.gz) 91 Kb
  • LPC: Ligand-Protein Contacts for 1XSE
  • CSU: Contacts of Structural Units for 1XSE
  • Likely Quarternary Molecular Structure file(s) for 1XSE
  • Structure Factors (203 Kb)
  • Retrieve 1XSE in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XSE from S2C, [Save to disk]
  • Re-refined 1xse structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XSE in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XSE
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XSE, from MSDmotif at EBI
  • Classification of representative domains in scop (Structural Classification of Proteins)
        - Domain d1xsea_, region A [Jmol] [rasmolscript] [script source]
        - Domain d1xseb_, region B [Jmol] [rasmolscript] [script source]
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xse] [1xse_A] [1xse_B]
  • SWISS-PROT database: [Q6QLL4]
  • Domain organization of [DHI1_CAVPO] by SWISSPFAM
  • Other resources with information on 1XSE
  • Community annotation for 1XSE at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

  • You may enter another PDB ID code
    Go [Back], to the [PDB Lite page], to the [OCA Search page] or to the [PDB Home page]
    OCA© by Jaime Prilusky, 1996-2014,2022
    Bioinformatics Unit
    Weizmann Institute of Science