1XV8 Hydrolase date Oct 27, 2004
title Crystal Structure Of Human Salivary Alpha-Amylase Dimer
authors S.Z.Fisher, L.Govindasamy, C.K.Tu, D.N.Silverman, H.Rajaniemi, R.
compound source
Molecule: Alpha-Amylase
Chain: A, B
Fragment: Hsa
Synonym: 1,4-Alpha-D-Glucan Glucanohydrolase
Ec: 3.2.1.1
Organism_scientific: Homo Sapiens
Organism_common: Human
Organism_taxid: 9606
Tissue: Saliva
symmetry Space Group: C 1 2 1
R_factor 0.228 R_Free 0.271
crystal
cell
length a length b length c angle alpha angle beta angle gamma
150.812 72.270 91.106 90.00 102.80 90.00
method X-Ray Diffractionresolution 3.00 Å
ligand CA, CL, PCA enzyme Hydrolase E.C.3.2.1.1 BRENDA
Gene
Ontology
ChainFunctionProcessComponent
A, B


Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (163 Kb) [Save to disk]
  • Biological Unit Coordinates (1xv8.pdb1.gz) 157 Kb
  • LPC: Ligand-Protein Contacts for 1XV8
  • CSU: Contacts of Structural Units for 1XV8
  • Likely Quarternary Molecular Structure file(s) for 1XV8
  • Structure Factors (147 Kb)
  • Retrieve 1XV8 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1XV8 from S2C, [Save to disk]
  • Re-refined 1xv8 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
  • View 1XV8 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1XV8
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1XV8, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1xv8_A] [1xv8] [1xv8_B]
  • SWISS-PROT database: [P04745]
  • Domain organization of [AMY1_HUMAN] by SWISSPFAM
  • Domains found in 1XV8: [Aamy] [Aamy_C ] by SMART
  • Other resources with information on 1XV8
  • Community annotation for 1XV8 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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