1YGM Membrane Protein date Jan 05, 2005
title Nmr Structure Of Mistic
authors T.P.Roosild, J.Greenwald, M.Vega, S.Castronovo, R.Riek, S.Choe
compound source
Molecule: Hypothetical Protein Bsu31320
Chain: A
Engineered: Yes
 Organism_scientific: Bacillus Subtilis Subsp. Subtilis Str.
Organism_taxid: 224308
Strain: Subsp. Subtilis Str. 168
Gene: Yugo-A
Expression_system: Escherichia Coli Bl21(De3)
Expression_system_taxid: 469008
Expression_system_strain: Bl-21(De3)
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pet-15b
methodSolution NMR
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceNMR structure of Mistic, a membrane-integrating protein for membrane protein expression., Roosild TP, Greenwald J, Vega M, Castronovo S, Riek R, Choe S, Science. 2005 Feb 25;307(5713):1317-21. PMID:15731457
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (278 Kb) [Save to disk]
  • Biological Unit Coordinates (1ygm.pdb1.gz) 27 Kb
  • CSU: Contacts of Structural Units for 1YGM
  • Retrieve 1YGM in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YGM from S2C, [Save to disk]
    • View 1YGM in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1YGM
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1YGM, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1ygm_A] [1ygm]
  • SWISS-PROT database: [Q5BU39]
  • Belongs to the mistic (mistic) family according to TCDB.
  • Domain organization of [MSTX_BACSU] by SWISSPFAM
    • Other resources with information on 1YGM
  • Community annotation for 1YGM at PDBWiki (http://pdbwiki.org)
  • NMR Ensemble (OLDERADO: core, domain and representative structure database)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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