1YW5 Peptidyl-prolyl isomerase ESS1 from Candida albicans date
authors Li, Z., Li, H., Devasahayam, G., Gemmill, T., Chaturvedi, V., Hanes, S.D., Roey, P.Van.
compound source
symmetry
R_factor
R_Free 0.242
crystal
cell
length a length b length c angle alpha angle beta angle gamma
method X-Ray Diffractionresolution 1.60
note 1YW5 is a representative structure
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceThe Structure of the Candida albicans Ess1 Prolyl Isomerase Reveals a Well-Ordered Linker that Restricts Domain Mobility(,)., Li Z, Li H, Devasahayam G, Gemmill T, Chaturvedi V, Hanes SD, Van Roey P, Biochemistry 2005 Apr 26;44(16):6180-9. PMID:15835905
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (39 Kb) [Save to disk]
  • Biological Unit Coordinates (1yw5.pdb1.gz) 35 Kb
  • CSU: Contacts of Structural Units for 1YW5
  • Likely Quarternary Molecular Structure file(s) for 1YW5
  • Structure Factors (295 Kb)
  • Retrieve 1YW5 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YW5 from S2C, [Save to disk]
  • Re-refined 1yw5 structure from PDB_REDO, a databank with updated and optimised macromolecular X-ray diffraction structure models
    • View 1YW5 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
    • Visual 3D analysis of 1YW5
  • Ramachandran plot from PDBSum
    • Structure-derived information
  • Electron Density related parameters from EDS Electron Density Server, at Upsala
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1YW5, from MSDmotif at EBI
    • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yw5_A] [1yw5]
  • SWISS-PROT database: [Q59KZ2]
  • Domain organization of [Q59KZ2_CANAL] by SWISSPFAM
  • Domain found in 1YW5: [WW ] by SMART
    • Other resources with information on 1YW5
  • Community annotation for 1YW5 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
    • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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