1YX7 Metal Binding Protein date Feb 19, 2005
title Nmr Structure Of Calsensin, Energy Minimized Average Structu
authors D.V.Venkitaramani, D.B.Fulton, A.H.Andreotti, K.M.Johansen, J.Jo
compound source
Molecule: Calsensin
Chain: A
Synonym: Lan3-6 Antigen
Engineered: Yes
Organism_scientific: Haemopis Marmorata
Organism_taxid: 38567
Expression_system: Escherichia Coli Bl21
Expression_system_taxid: 511693
Expression_system_strain: Bl21
Expression_system_vector_type: Plasmid
Expression_system_plasmid: Pgex4t3
methodSolution NMR
related structures by homologous chain: 1YX8
Gene
Ontology
ChainFunctionProcessComponent
A


Primary referenceSolution structure and backbone dynamics of Calsensin, an invertebrate neuronal calcium-binding protein., Venkitaramani DV, Fulton DB, Andreotti AH, Johansen KM, Johansen J, Protein Sci 2005 Jul;14(7):1894-901. Epub 2005 Jun 3. PMID:15937283
Data retrieval
  • Asymmetric unit, PDB entry: [header only] [complete with coordinates] (27 Kb) [Save to disk]
  • Biological Unit Coordinates (1yx7.pdb1.gz) 24 Kb
  • CSU: Contacts of Structural Units for 1YX7
  • Experimental data, such as chemical shifts, at BioMagResBank (BMRB)
  • NMR Restraints Grid from BioMagResBank (BMRB)
  • Retrieve 1YX7 in mmCIF format [Save to disk]
  • SEQRES to COORDINATES correlation for 1YX7 from S2C, [Save to disk]
  • View 1YX7 in 3D
  • Proteopedia, because life has more than 2D.
  • On Jmol, a nice Rasmol like molecule viewer. This is good for easiest viewing of basic structure.
  • On FirstGlance, an excellent tool for a guided tour on the structure components, by E. Martz.
  • Visual 3D analysis of 1YX7
  • Ramachandran plot from PDBSum
  • Structure-derived information
  • Dipole moment, from Dipole Server at Weizmann Institute
  • 3D motif for 1YX7, from MSDmotif at EBI
  • Sequence-derived information
  • View one-letter amino acid or nucleotide sequence for each chain: [1yx7_A] [1yx7]
  • SWISS-PROT database: [Q25088]
  • Domain organization of [CLSS_HAEMA] by SWISSPFAM
  • Domain found in 1YX7: [EFh ] by SMART
  • Other resources with information on 1YX7
  • Community annotation for 1YX7 at PDBWiki (http://pdbwiki.org)
  • MMDB (Entrez's Structure Database)
  • Movements, Movies and Images
  • Images from IMB Jena Image Library of Biological Macromolecules.

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